Gene Symbol | SIGE |
Entrez Gene ID | 832477 |
Full Name | sigma factor E |
Synonyms | ATSIG5,MLE8.4,MLE8_4,SIG5,SIGMA FACTOR,SIGMA FACTOR 5,sigma factor E |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » SIGE cDNA ORF clone
Gene Symbol | SIGE |
Entrez Gene ID | 832477 |
Full Name | sigma factor E |
Synonyms | ATSIG5,MLE8.4,MLE8_4,SIG5,SIGMA FACTOR,SIGMA FACTOR 5,sigma factor E |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001343841.1 | NP_001330409.1 | sigma factor E |
NM_001343842.1 | NP_001330408.1 | sigma factor E |
NM_122317.4 | NP_197800.1 | sigma factor E |
Oryza sativa (rice) | Os05g0586600 | NP_001056463.1 |
Arabidopsis thaliana (thale cress) | SIGE | NP_197800.1 |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See LH, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie WR, Wilson RK, Murphy G, Bancroft I, Volckaert G, Wambutt R, D?sterh?ft A, Stiekema W, Pohl T, Entian KD, Terryn N, Hartley N, Bent E, Johnson S, Langham SA, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst RK, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes HW, Bevan M, Fransz P, , ,
Nature408(6814)823-6(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The role of SIG5 protein in the transcription of chloroplast genes via protein phosphatase 2C-dependent activation of nuclear genes
Title: Abscisic acid affects transcription of chloroplast genes via protein phosphatase 2C-dependent activation of nuclear genes: repression by guanosine-3'-5'-bisdiphosphate and activation by sigma factor 5.
nuclear-encoded SIGMA FACTOR5 (SIG5) controls circadian rhythms of transcription of several chloroplast genes, revealing one pathway by which the nuclear-encoded circadian oscillator controls rhythms of chloroplast gene expression.
Title: Circadian control of chloroplast transcription by a nuclear-encoded timing signal.
Cryptochromes 1 and 2 mediate SIG5 transcription at different light wavelengths. SIG5 activates the psbD blue-light-responsive promoter.
Title: Light induction of Arabidopsis SIG1 and SIG5 transcripts in mature leaves: differential roles of cryptochrome 1 and cryptochrome 2 and dual function of SIG5 in the recognition of plastid promoters.
The NEP (the (phage-type) plastid RNA polymerase) promoter cluster can help maintain RNA synthesis in situations where no functional sigma factor is available for PEP (the bacterial-type plastid RNA polymerase).
Title: A promoter switch that can rescue a plant sigma factor mutant.
The following SIGE gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SIGE cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb19398 | |
Clone ID Related Accession (Same CDS sequence) | NM_001343841.1 , NM_001343842.1 , NM_122317.4 | |
Accession Version | NM_001343841.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1554bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | sigma factor E | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGGGAGTTG TGTCTATTTC AAGTTCAGCT GCAAGATCTC CACTCGGGTT GGGCAACGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001330409.1 |
CDS | 222..1775 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001343841.1 |
1 | ATGGGAGTTG TGTCTATTTC AAGTTCAGCT GCAAGATCTC CACTCGGGTT GGGCAACGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb19398 | |
Clone ID Related Accession (Same CDS sequence) | NM_001343841.1 , NM_001343842.1 , NM_122317.4 | |
Accession Version | NM_001343842.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1554bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | sigma factor E | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGGGAGTTG TGTCTATTTC AAGTTCAGCT GCAAGATCTC CACTCGGGTT GGGCAACGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001330408.1 |
CDS | 295..1848 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001343842.1 |
1 | ATGGGAGTTG TGTCTATTTC AAGTTCAGCT GCAAGATCTC CACTCGGGTT GGGCAACGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb19398 | |
Clone ID Related Accession (Same CDS sequence) | NM_001343841.1 , NM_001343842.1 , NM_122317.4 | |
Accession Version | NM_122317.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1554bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | sigma factor E | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_122317.3. |
1 | ATGGGAGTTG TGTCTATTTC AAGTTCAGCT GCAAGATCTC CACTCGGGTT GGGCAACGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_197800.1 |
CDS | 222..1775 |
Translation |
Target ORF information:
Target ORF information:
|
NM_122317.4 |
1 | ATGGGAGTTG TGTCTATTTC AAGTTCAGCT GCAAGATCTC CACTCGGGTT GGGCAACGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. |